PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCH89171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 104aa MW: 11666.4 Da PI: 10.4946 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.8 | 1.9e-32 | 31 | 89 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +dp+++++tYegeH+h MCH89171.1 31 ADEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPTMLIVTYEGEHRHA 89 69************************9888****************************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 104 aa Download sequence |
MRFTRFSGGK NRVKRSVRVP AISSKTADIP ADEYSWRKYG QKPIKGSPYP RGYYKCSTVR 60 GCPARKHVER APDDPTMLIV TYEGEHRHAI QAAMQENAAG IVGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31550.2 | 6e-53 | WRKY family protein |