PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH89038.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Dof

Protein Properties

Length: 291aa MW: 32477 Da PI: 5.016

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH89038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.6	3.8e-40	63	124	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GGa+rnvPvG+grrknk+sss MCH89038.1 63 PDKILPCPRCHSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKNKNSSS 124 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MEEELSKCKK EKDETLAQSS QKNTDLDTAS RLVEESINPS TEEEQKSNEE QAENAQDKTL 60 KKPDKILPCP RCHSMDTKFC YYNNYNVNQP RHFCKNCQRY WTAGGAMRNV PVGAGRRKNK 120 NSSSHYRQIT VPDAAAVQNS QSDSPNGIHP PPLNCNGTVF TFGTDSPLCE SMESALNIVD 180 KGVNNCTNNG FIRPENLRIH VPYAGEENSN ESPDASTMPA EDATVNNSLE QAMPNCQNFP 240 PQVPYYPGAP WLLPWNPSQW SSQVQPPPAF FPQGFAMPVY PPPAYWGFTV P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-55	Dof family protein