PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH88485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | TCP | ||||||||
Protein Properties | Length: 326aa MW: 35987.8 Da PI: 6.5925 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 119.3 | 4.8e-37 | 16 | 134 | 1 | 112 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssaseceaesssssasnsssg....k 89 a+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++ + +++e+e ++++ + ++ + MCH88485.1 16 ATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLppwnpiP----NATEEEGTNNNVVETNEMviaaE 110 589**************************************************************6654331....22322222222222222255553 PP TCP 90 aaksaa.kskksqksaasalnlak 112 +++s+ + +++++++++++++ + MCH88485.1 111 NSESSGyNMQQNNHNHHNHSAFIQ 134 333333366666666665555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
TGGEIVQVQG GHIVRATGRK DRHSKVYTAK GPRDRRVRLS AHTAIQFYDV QDRLGYDRPS 60 KAVDWLIKKA KSAIDKLDQL PPWNPIPNAT EEEGTNNNVV ETNEMVIAAE NSESSGYNMQ 120 QNNHNHHNHS AFIQSTIDND AIAFFPTSSV AETMNFQSYS SDIISRTNNS TQDLGLSLHS 180 FQDNSATNDQ TLFSESNPVG FDANYHRIVN WNNDHGTTDM NRTGFMVNSP AFLGQGSAFS 240 AHRGTLQSSF SPSLRPXNDI PMTDSSVDHH SHKSHSHQPI HQASIFGSRF LSDALTGYCI 300 PARIQGDDES HGVGSERPSS SSNSHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-63 | TCP family protein |