PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH88086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19002.8 Da PI: 8.5052 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.2 | 4.6e-11 | 22 | 66 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K +Ka++L + v+Y+k L MCH88086.1 22 HSIAERLRRERIAERMKALQELVPSiN------KTDKAAMLDEIVDYVKFL 66 99***********************77......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MPQAPGIRPR VRARRGQATD PHSIAERLRR ERIAERMKAL QELVPSINKT DKAAMLDEIV 60 DYVKFLRLQV KVLSMSRLGG AGAVAQLVAD VPVSAVEGDD IEGGANQQAW AKWSNDGTEQ 120 QVAKLMEEDV GAAMQLLQSK ALCIMPISLA SAIFRMPQSD TSTIIKPESN NSHT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 32 | RLRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 2e-68 | bHLH family protein |