PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH87742.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 275aa    MW: 30381.1 Da    PI: 8.9814
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH87742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.3e-30123182159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +C+vkkkv+rs edp+vv+ tYegeHnh+
  MCH87742.1 123 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCTVKKKVQRSVEDPSVVVATYEGEHNHP 182
                 58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
SSGDALVEEL KRVSAENKKL TGMLTEMCEN YNTLRNNLME YMRKYPDKES SPSKKRKSDE  60
ISSSNNNLMG GGEGGGVNGN NSESSSSDED QSCKKPMELE TCIKAKVSRV YYKQESSDSS  120
LIVKDGYQWR KYGQKVTRDN PSPRAYFKCS FAPSCTVKKK VQRSVEDPSV VVATYEGEHN  180
HPHPSQMEST SSGTNNRCRN PISSAVPSSA PSTVTIDWTK SKCSNESSSK KMMINNPKME  240
VPQILVEQMA TSLTKDLNFR AALAAAISGK MLHQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-82WRKY family protein