PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH87450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LBD | ||||||||
Protein Properties | Length: 137aa MW: 15529 Da PI: 4.7029 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 30.7 | 8.6e-10 | 2 | 42 | 60 | 100 |
DUF260 60 slvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 slvyeAear+rdPv+G + +++l++ql++++++++ +k++ MCH87450.1 2 SLVYEAEARVRDPVNGYLDYVHNLEHQLMEVEQKINNVKSH 42 9**********************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
DSLVYEAEAR VRDPVNGYLD YVHNLEHQLM EVEQKINNVK SHLTKYLSPE VIQFVMNNPS 60 CFGFEPNNNQ NSTAQLTAAQ HQQLELLRQT IYRSGTRXNP VDGDGFGQHM DANVLDLDGA 120 TLFRAIIIPH DMINGNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66870.1 | 2e-09 | LBD family protein |