PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH87290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | ARR-B | ||||||||
Protein Properties | Length: 212aa MW: 23896.2 Da PI: 6.6921 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.2 | 2.4e-25 | 160 | 211 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 kpr++W+ +LH++Fv av+qL G++kA+Pk+il++m+v+ +t+e+v+SHLQ + MCH87290.1 160 KPRVVWSVDLHRKFVAAVNQL-GIDKAVPKKILDMMNVENITRENVASHLQAF 211 79*******************.*****************************87 PP | |||||||
2 | Myb_DNA-binding | 32.5 | 2e-10 | 162 | 210 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 r W+ +++ ++v av+qlG + +k+I +m+ ++ t++++ s++q MCH87290.1 162 RVVWSVDLHRKFVAAVNQLGIDkaVPKKILDMMNvENITRENVASHLQA 210 678********************************************96 PP | |||||||
3 | Response_reg | 60.1 | 1.2e-20 | 2 | 84 | 28 | 109 |
EESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 28 eaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 ++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + ++ Ga d+l Kp+ eel + MCH87290.1 2 TTSQARTALTMLRENKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKN 84 6889999*****888778*******************87754.558***********************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
TTTSQARTAL TMLRENKDKF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSAYGDTKL 60 VMKGISHGAC DYLLKPVRLE ELKNIWQHVI RKKKSDPKEK NKTSKLDKTT SDSGSGLRSA 120 GAENSDENGK LTKKRKDQDE DEDEDKENGN DNEDPSAQKK PRVVWSVDLH RKFVAAVNQL 180 GIDKAVPKKI LDMMNVENIT RENVASHLQA FF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 3e-81 | ARR-B family protein |