PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH87223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22446.1 Da PI: 10.3583 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.7 | 5.6e-15 | 14 | 60 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ MCH87223.1 14 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYLKQLR 60 7999**********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
LRGKGGPQDE LSANHVLAER RRREKLNERF IILRSLVPFV TKMDKASILG DTIEYLKQLR 60 RKIQDLETRN RQIESERSGG TVVVGPTEKK KVRIVEGGSG ANRAKAVEVV EKEVVASVQV 120 SIIESDALLE IECLHREGLL LDVMQMLREL RIEVIGVQSS LNNGVFVAEL RAKVKENGGN 180 GKKVSIVEVK RALNQLIPHN I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 24 | ERRRRE |
2 | 20 | 25 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 8e-41 | bHLH family protein |