PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH86928.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C2H2

Protein Properties

Length: 293aa MW: 32828.6 Da PI: 9.8151

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH86928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k Fs++ L H++ H MCH86928.1 105 FSCSFCKKQFSTSQALGGHQNAH 127 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MATTSNPSST TSEDIFQKSG EEVNNINKGK EVVQCQQPSN SNTKLPLDFI KHSKDDSIRG 60 SKVQERDFFT PTKNLEVGSS SLRRANNKTN NEENPKNKSS DSKTFSCSFC KKQFSTSQAL 120 GGHQNAHKRE RALAKHRQEM RNGFGIPRHP FPYYTNYPSL YSSYYGFGSF NKALGIRMES 180 MIHKPSYSLT PPPYKFGSTP TWAPMQEMRN FSSLGGLKIE GLNPNNGSSA TPTWRNNMIK 240 LDNIRESSIN VATKSNLIVD KSAVVVINND HHGMKKEEDS DSESTELDLT LKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	4e-17	C2H2 family protein