PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH86880.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Dof
Protein Properties Length: 294aa    MW: 32896.2 Da    PI: 8.7542
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH86880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof109.91.3e-3465122360
      zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                 + +++cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG+ r + +G+grrknk 
  MCH86880.1  65 DIIVPCPRCKSMDTKFCYYNNYNVKQPRHFCKNCQRYWTAGGTTRSMLIGAGRRKNKI 122
                 56789***************************************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MKELTSMQDD EASFQTTEDS NSPTSSSLVE NPKTPLSETE TSELNSNKID EQSDMSQDKS  60
PNKPDIIVPC PRCKSMDTKF CYYNNYNVKQ PRHFCKNCQR YWTAGGTTRS MLIGAGRRKN  120
KIXXXXXXXX XXXXXXXXXX XXXXXMNVGS HEGTSDKSSQ SVFPPQFPWN PAMFYPVTFY  180
PNIAYYGGCL PPSWSVQSMS PQSSGPSKPT LGKHSRDGEI IFHSNSKKEK LGSENNKIES  240
NINSVLIPKT LRTGLFKGFA SKGDEKSYVV EASSSILQAN PAALSRSLVF HERI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62430.13e-41Dof family protein