PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | MCH86747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 239aa MW: 27244.8 Da PI: 4.5644 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 31.5 | 2.9e-10 | 188 | 232 | 9 | 53 |
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 ++ +e L ++F++n p ++ + L+k+lgL+ ++V WF+N R+ MCH86747.1 188 HDAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARY 232 578899*************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence |
MKDVFKEEAA IPDGDDALLN QEEEWPSDDP EDDDYNPERK EDSHDGINTE GNDENASADS 60 SSSGSMWSLN GECSLLDEGI NLEYYSVNGH VDSDESGEIA CGRRQRRAVD YKKLYDEMFG 120 KDALPYEQVS EDEDWGPGKR RRREKESDAV NTLMTLHESE NKHPNKEKKD RIRGDSSGIK 180 RPCFRLPHDA VEKLRQVFAE NELPPKSVKD ALSKELGLDA AKVNKWFKNA RYMALKTRK |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 139 | 168 | KRRRREKESDAVNTLMTLHESENKHPNKEK |
2 | 140 | 169 | KRRRREKESDAVNTLMTLHESENKHPNKEK |
3 | 140 | 145 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G29940.2 | 9e-51 | HB-PHD family protein |