PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH86322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | E2F/DP | ||||||||
Protein Properties | Length: 193aa MW: 21121 Da PI: 9.8425 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 84.5 | 8.6e-27 | 111 | 176 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+i wkg MCH86322.1 111 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKNIKNRILWKG 176 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MVILCKNVEK TFPAGTITVH CSLSVSGLVM LNYELLIKRK NGMNESQGES QKWSNSPGYT 60 NVTNSPFKTP LSAKEGRTHK SRVSKEGRSC PXTPISNAGS PSPLTPAGSC RYDSSLGLLT 120 KKFINLIKHA EDGILDLNKA AETLEVQKRR IYDITNVLEG IGLIEKNIKN RILWKGIESS 180 TPGNVDGDIN MLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36010.1 | 2e-56 | E2F/DP family protein |