PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH85467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | C2H2 | ||||||||
Protein Properties | Length: 245aa MW: 27388.4 Da PI: 6.0313 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13 | 0.00032 | 96 | 118 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H MCH85467.1 96 FSCNYCQRKFFSSQALGGHQNAH 118 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MQQNIDLEVE AYAEYESDVT SQVASNVSTQ ETSSNISKPI GINLNHPNLD DNDISLDLTL 60 NFKKNELRDS NSIGFSISST SESSNEPASA TIQRVFSCNY CQRKFFSSQA LGGHQNAHKR 120 ERTLAKRAMR MGIFSDRYNA SLASLPLHGS FRSLGIKAHS SMHYGFSVPT TIRPHNHHEM 180 KNNTKFEQGC VGFPIFLEDE ESELLWPGSF RQASEAGDGQ QNFMLTEMNP CVDKEKSTPD 240 LTLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 2e-49 | C2H2 family protein |