PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH85440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | LFY | ||||||||
Protein Properties | Length: 120aa MW: 13615.6 Da PI: 9.9137 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 247.7 | 5.1e-76 | 1 | 106 | 281 | 386 |
FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLCh 379 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdee sn+lrr fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiWYvPtkLrqLCh MCH85440.1 1 VTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCH 99 9************************************************************************************************** PP FLO_LFY 380 lerskas 386 +er+ a+ MCH85440.1 100 AERNGAA 106 ***9765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
VTNQVFRYAK KAGASYINKP KMRHYVHCYA LHCLDEEVSN ELRRGFKERG ENVGAWRQAC 60 YKPLVAIAAR QGWDIDAIFN AHPRLSIWYV PTKLRQLCHA ERNGAAASSS VSVGTTHLPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 2e-67 | LFY family protein |