PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH85083.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 127aa    MW: 14037.1 Da    PI: 4.3763
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH85083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.31.1e-10347345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      W+ e d  + +a + ++ +   +W++Ia+ ++ g+t +++k+++ 
       MCH85083.1  3 EWSREQDIAFENALATYPEDasdRWEKIAADVP-GKTVEEIKEHYE 47
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
SSEWSREQDI AFENALATYP EDASDRWEKI AADVPGKTVE EIKEHYELLV DDVSQIEAGC  60
VPLPSYNSSS EGSTGQASDE GVGGKKNGHN NESNHGTKAS RSDQERRKGI AWTEEEHRQV  120
LSLLICF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-50MYB family protein