PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH84900.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 137aa    MW: 16027.2 Da    PI: 8.6627
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH84900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.97.5e-1344135999
                 HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ++++++ l +p + a ++ +  ++s+ ++ ++ ++g + ++k    + ++++++lt+GW eF kan+L+egD + F+l+++  +   v ++r+
  MCH84900.1  44 SNTTNQVLHIPPRTA-KCVLRDKKSILIKTQHnLDGTKCTIKAYTrKIGKKEMYLTEGWYEFKKANRLREGDKLEFQLSNHPPEVVIVDIVRR 135
                 66778899*****99.7755556788888887799999999994434555559************************9988777778888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MNNWRMNLIA SVDNVSDDDT YTLYDFENDR VFGWELIVSE AYASNTTNQV LHIPPRTAKC  60
VLRDKKSILI KTQHNLDGTK CTIKAYTRKI GKKEMYLTEG WYEFKKANRL REGDKLEFQL  120
SNHPPEVVIV DIVRRNS