PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH84445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21393.5 Da PI: 4.5866 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.7 | 1.6e-11 | 138 | 181 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRR r+++++ Lr+l+P+ +K++Ka+i Av Y+++Lq MCH84445.1 138 ISERRRRGRMKDKLYALRSLVPNI-----TKMDKASIIGDAVSYVHDLQ 181 78*********************7.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDEHQNSLVY TNNFELHDFI DDPNFDQFID LIRGENEDAI CNFGSDLIND CFVDNNNHQL 60 LLNPPNPLIF NHNSNNYSNI VNVYDPSSST IGSFSCYDGE VKGEGENDGD DSSATTITTT 120 AIDDAKPRAK NDRSKTLISE RRRRGRMKDK LYALRSLVPN ITKMDKASII GDAVSYVHDL 180 QAQSRKLKAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28160.1 | 4e-40 | bHLH family protein |