PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH84406.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GATA | ||||||||
Protein Properties | Length: 121aa MW: 13004.3 Da PI: 4.5293 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 43.2 | 5.3e-14 | 3 | 30 | 8 | 35 |
GATA 8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35 +Tp +Rrgp g++tLCnaCGl+++ kg+ MCH84406.1 3 HTPAMRRGPAGPRTLCNACGLMWANKGT 30 6************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
EKHTPAMRRG PAGPRTLCNA CGLMWANKGT LRDLRKGGRN LSVEQSGLDP SIDVKPTVLE 60 GELSVIENEQ GISENPSKAI AAEGSNNHAL NPSDEELPES AEHLTNTLPL VIDHSSENDE 120 Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 4e-18 | GATA family protein |