PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH83586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | HB-other | ||||||||
Protein Properties | Length: 228aa MW: 25517.3 Da PI: 8.3288 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 20 | 1.2e-06 | 1 | 57 | 1 | 57 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + +s++e +e+++ g+t +qV+ +F +R + +k MCH83586.1 1 KRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDYFTSQRSRVRK 57 799**************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
KRPRDLLNPK AVNYMQSVFS IKDAISKKES REISALFGVT VTQVRDYFTS QRSRVRKQVQ 60 LSKERALKSN SCAESLDVQI NSDPVRSMNP APLNSVGATN VEEASYSAQE AALSDLDDSD 120 KQFVENIFGL MQKEETFCGQ EKLLEWILTI HNFSVLLWFL TGGGAMTLAN WLSKAAVEEQ 180 TSVLLLVLKV LCHLPLHKAH PAHISALLQS VNRLRFYRTS DCTLMASV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02560.2 | 4e-73 | HB-other family protein |