PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH83405.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MYB_related | ||||||||
Protein Properties | Length: 137aa MW: 15340.6 Da PI: 10.919 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.1 | 8.3e-13 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G+g W+tI +R+ ++k++w++ MCH83405.1 5 KQKWTAEEEAALKAGVVKHGSGKWRTILTDPEfssilRTRSNVDLKDKWRN 55 79************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MGAPKQKWTA EEEAALKAGV VKHGSGKWRT ILTDPEFSSI LRTRSNVDLK DKWRNINVTA 60 VWGSRQKAKL ALKKNLALPA PKTNNNQLTV SKVVQREDIL DVKPLAVSSG TLHSPNSKEQ 120 VSRFKNFQLN ISAIYYQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67580.1 | 5e-37 | MYB_related family protein |