PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH82992.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Dof

Protein Properties

Length: 404aa MW: 44917.2 Da PI: 7.2831

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH82992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.1	8e-38	72	131	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GGa+rnvP+G+g+r+nk+s MCH82992.1 72 PDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKKCQRYWTAGGAIRNVPIGAGKRRNKHS 131 78999*****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
NGLEEESTTA DVVVPLNDVS IKQANPQEHA NAFPNMYETG TSKPVTKAVH RTNEHRTAKR 60 DTDNQEKVFK KPDKVLPCPR CNSLETKFCY FNNYNVNQPR HFCKKCQRYW TAGGAIRNVP 120 IGAGKRRNKH SPLQNCEVPV TLDVVPVIHT DSNPASLSEE VPLSESLEVL NLKGHRKIEI 180 DLSTVKEDTD EPSRSSVKAA ESGEMEYSEN GIEHVGLTTQ YNGLIPLHAL HYYSAPPWQW 240 NPCWNPTAFK PENITSSPAT MMAVEIPMAP SSYWGCMPNW VGQMEEFNGI PSPSSSVSSG 300 NCSGNRSPTL GKHRRDGSTQ EEDTMKPNIW VPKTIRINDP EEAAKSSIWS TLATKSKQNK 360 PVMKGSVFKS FEPKSNASSR DLDDNQILRA NPAAFSRSGS FQES

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

NGLEEESTTA DVVVPLNDVS IKQANPQEHA NAFPNMYETG TSKPVTKAVH RTNEHRTAKR  60
DTDNQEKVFK KPDKVLPCPR CNSLETKFCY FNNYNVNQPR HFCKKCQRYW TAGGAIRNVP  120
IGAGKRRNKH SPLQNCEVPV TLDVVPVIHT DSNPASLSEE VPLSESLEVL NLKGHRKIEI  180
DLSTVKEDTD EPSRSSVKAA ESGEMEYSEN GIEHVGLTTQ YNGLIPLHAL HYYSAPPWQW  240
NPCWNPTAFK PENITSSPAT MMAVEIPMAP SSYWGCMPNW VGQMEEFNGI PSPSSSVSSG  300
NCSGNRSPTL GKHRRDGSTQ EEDTMKPNIW VPKTIRINDP EEAAKSSIWS TLATKSKQNK  360
PVMKGSVFKS FEPKSNASSR DLDDNQILRA NPAAFSRSGS FQES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-57	Dof family protein