PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH82208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NF-X1 | ||||||||
Protein Properties | Length: 205aa MW: 22947.2 Da PI: 8.4954 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 16.3 | 2.2e-05 | 1 | 14 | 6 | 19 |
zf-NF-X1 6 CqklCHeGpCppCp 19 C ++CH+G CppC+ MCH82208.1 1 CVEICHRGACPPCR 14 889**********8 PP | |||||||
2 | zf-NF-X1 | 17.8 | 7.5e-06 | 49 | 68 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CGkH C++ CH G+C++Cp+ MCH82208.1 49 CGKHVCERGCHSGECGECPL 68 ******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
CVEICHRGAC PPCRARGVYR CQCGKVKEER ECCDRVFRCD DPCEKKLSCG KHVCERGCHS 60 GECGECPLQG KRTCPCGKRV YEGMPCDAPM QVCGATCDKM LPCGYHRCHE RCHRGQCIET 120 CRIVVRKCCR CGSLKKDSRY LAIKIWYVRG SVRRCETVVG ILVNAAAVME IALRAQRYVA 180 RGFAVGTINA NLHAIEVPVL LVLLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05660.1 | 2e-60 | NF-X1 family protein |