PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH81008.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 131aa    MW: 14457.3 Da    PI: 5.5896
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH81008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.3e-05691071255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R  +i +++  L ellP+      +  s a iL  +++Y+++Lq
  MCH81008.1  69 RKLQIANSLKALHELLPNT-----EVGSQAHILDDVIDYVQYLQ 107
                 55589999**********7.....468****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MEGESNKGSW VPNTPTLGGS SSFNDSGKAD CFLDLIDKVE KHRNTKLFPI QLDLIGRAVT  60
PSIPNSERRK LQIANSLKAL HELLPNTEVG SQAHILDDVI DYVQYLQNQV KELCGSKLQA  120
DSNATPLVFH E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58010.18e-11bHLH family protein