PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH80617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | GATA | ||||||||
Protein Properties | Length: 131aa MW: 14134.4 Da PI: 8.136 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.8e-18 | 42 | 77 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 C++Cgt++ Tp++Rrgp+g+++LCnaCGly++ +g MCH80617.1 42 CTHCGTSSksTPMMRRGPSGPRSLCNACGLYWANRG 77 ********************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MSKCRMQRNK GQFTSSKKQD GANGWGTDQD SGQDDSQSET SCTHCGTSSK STPMMRRGPS 60 GPRSLCNACG LYWANRGALR DLSKRHHELS IVPAEQVDQG NSSDCGTATI PSHNNLAAFS 120 ENNNQALVAD R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 2e-39 | GATA family protein |