PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH80606.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Dof

Protein Properties

Length: 360aa MW: 38732.3 Da PI: 9.2278

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH80606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.5e-39	43	102	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +e+++kcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk+ MCH80606.1 43 HEQNMKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKM 102 57899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MSPDETKTSK SPKDKDNNQQ GSGGGGGKKT CSSSSTSTTK PPHEQNMKCP RCDSPNTKFC 60 YYNNYSLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK KMRPSSSSSR FSCDNSKDSA 120 SSSELVGGLK FLHSLSSPSM DFHLGTGLPF PRLQLQHQQN HHNLSPIFNQ FSSFGETSSA 180 MNHNNYPASS NSIAGSAMNF PFSVGNNNNY NGAIQGMSSM NIHSNVASSI ESLSSMNQDL 240 HWKLQQQRLS MLFGGGENQQ KENNQTEKPL QPILFQNLEV TKQQDGGNFS VGNSRRESIN 300 GGDTPTEWFF GNSYGSVAAT PTASGGGGGG GHDSGSNWNG GGGGGVHGWS DVQQQYSALP

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MSPDETKTSK SPKDKDNNQQ GSGGGGGKKT CSSSSTSTTK PPHEQNMKCP RCDSPNTKFC  60
YYNNYSLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK KMRPSSSSSR FSCDNSKDSA  120
SSSELVGGLK FLHSLSSPSM DFHLGTGLPF PRLQLQHQQN HHNLSPIFNQ FSSFGETSSA  180
MNHNNYPASS NSIAGSAMNF PFSVGNNNNY NGAIQGMSSM NIHSNVASSI ESLSSMNQDL  240
HWKLQQQRLS MLFGGGENQQ KENNQTEKPL QPILFQNLEV TKQQDGGNFS VGNSRRESIN  300
GGDTPTEWFF GNSYGSVAAT PTASGGGGGG GHDSGSNWNG GGGGGVHGWS DVQQQYSALP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	2e-52	Dof family protein