PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH80459.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29051.5 Da PI: 9.2837 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 84.8 | 1.6e-26 | 14 | 122 | 34 | 128 |
NAM 34 ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.............tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkg 116 i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ MCH80459.1 14 IEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqteecdlqgtssGGETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKP 110 555537**********.555666799******************8789999988854433567************.999***********554799999 PP NAM 117 ektdWvmheyrl 128 ekt+Wvmh+y+l MCH80459.1 111 EKTNWVMHQYHL 122 9*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MKSHPLIDEF ILTIEGEDGI CYTHPEKLPG VTRDGLSRHF FHRPSKAYTT GTRKRRKIQT 60 EECDLQGTSS GGETRWHKTG KTRPVMVNGK QKGCKKILVL YTNFGKNRKP EKTNWVMHQY 120 HLGQHEEEKE GELVVSKIFY QTQPRQCNWS DNNNHRIGAT ATITGEGSGG GEANNNYGRR 180 DSGSGSTSSK EIVTHNHSHG HIHRDEMSAV VGVNPLTSFT NALDIQHLKS DHFGLLPFRK 240 STFDEVRYIY YLELTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29230.1 | 1e-101 | NAC family protein |