PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80326.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family HB-other
Protein Properties Length: 358aa    MW: 39306.9 Da    PI: 7.8805
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80326.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.13.9e-05173233154
                 TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 
                 +rkRt +++eq+   e++   ++ +  +a++ +  A+kl     ++t +q k+W  Nr+a+
  MCH80326.1 173 KRKRTIMNDEQVLMIERALLDEPDMqrNAASLQSWADKLssngsEVTSSQLKNWLNNRKAR 233
                 79****************99866661166789****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MYKCAQLLCQ KTQDSKFGES SWDKFYKLNI NESYQEAQSA GGCPLPLTGK EPSDLDKKGG  60
KVKEGMSENS SYANLEQRNT QAEDKVQGNG SNRQSQVENK GISGKTALGG ARDTDKDAHK  120
IETSGSDASS AKGKNAVVHM DNSDLSKSNE RLKKVTVKEN PEDEKSELAQ RKKRKRTIMN  180
DEQVLMIERA LLDEPDMQRN AASLQSWADK LSSNGSEVTS SQLKNWLNNR KARLARTAKD  240
VRPAGDDVDN PVSDRQIGSA LGPHDSPNGP GQHVVLVGAQ GEEIGKGKVF QSHGMWYGKT  300
LEELATCVVD VCELRVDKGL RLPYSSEATG TTFAEAQTKF GVMRVLWDLN KILVLRSD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RKKRKR
2172177KKRKRT