PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH80159.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 225aa    MW: 25897.3 Da    PI: 7.4223
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH80159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.94.2e-14135215790
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 + +v+++ +lv+p +f+++h++ + +s++l+       +W v+++y+++ +  ++tkGW eFv++ ++k gD+++F+ ++ ++ 
  MCH80159.1 135 KVSVTSLFMLVIPSEFLKRHNIFSGNSVELK--V-GEGTWFVEVSYDQHLDYGWFTKGWPEFVRECKVKIGDTCLFEIIDLKNH 215
                 5689999*************76655665565..3.4589**************************************7754444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
TNSYRGDMGK NAKKCTKTKD GNERSCTNSN PNENPSFTLS LPRSYVEGAR IRLNIPNHFS  60
KDYKNELLQG NAAIRSAGED RTWQEHKLQV GDVCKFEMTQ REPLQFIITN TPSTKEPCPE  120
QFQDYETPNL QNKFKVSVTS LFMLVIPSEF LKRHNIFSGN SVELKVGEGT WFVEVSYDQH  180
LDYGWFTKGW PEFVRECKVK IGDTCLFEII DLKNHVFKVS IVLDV