PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MCH79328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 156aa MW: 17480.1 Da PI: 7.1327 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 56.8 | 2.8e-18 | 28 | 59 | 20 | 51 |
HHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 20 ilKKAeELSvLCdaevaviifsstgklyeyss 51 +lKKA+ELSvLCdaevavii+s tgklye+ss MCH79328.1 28 LLKKAKELSVLCDAEVAVIIYSGTGKLYEFSS 59 8*****************************96 PP | |||||||
2 | K-box | 37.5 | 1e-13 | 88 | 150 | 7 | 69 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 s +e ae + + a L++ei +L+++ ++ G++L+ L lkeLq Le+qL +++ +++kK MCH79328.1 88 PSGDEPPAEVVEPDTALLQEEITKLRSSYLRMSGKELDGLGLKELQYLENQLCEGICAVKNKK 150 44566667777888999*********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MGRGKIEIKK IXXXXXXXXX XXXXXXXLLK KAKELSVLCD AEVAVIIYSG TGKLYEFSSK 60 SMEHTLSRYG TRSLDLNNGA EQQQQQQPSG DEPPAEVVEP DTALLQEEIT KLRSSYLRMS 120 GKELDGLGLK ELQYLENQLC EGICAVKNKK GRPNCM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 1e-20 | MIKC_MADS family protein |