PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG073900.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 352aa MW: 37068 Da PI: 10.5847

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG073900.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.7	1.5e-12	41	159	17	126
NAM 17 eyLkkkvegkk...leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 + L+++v+g + l++ ++ vd+y ++P+dL + + +++ yf + +at+ r++r++ g+Wk+ +v ++ ++ +g TRIDC7BG073900.4 41 DLLRRRVDGFPtwmLPA-YLVHGVDVYGHHPQDLLRrhppaTSPDGKRASYFVNLVRPLTATDARRSRVVPGGFWKSERAPVPVEAAPDKMIG 132 56888888888543333.4599**********633455343446667799999999999**********************9* PP NAM 102 lkktLvfy..kgrapkgektdWvmhey 126 +k+ + f +++++ g + +mhe TRIDC7BG073900.4 133 TKQAFSFIskEAEHKGGPRGGFIMHEL 159 ****433456668899***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MASIGNGKPD AQGQERQAAR LLPPAEVPPP HTDAGLVVLF DLLRRRVDGF PTWMLPAYLV 60 HGVDVYGHHP QDLLRRHPPA TSPDGKRASY FVNLVRPLTA TDARRSRVVP GGFWKSERAP 120 VPVEAAPDKM IGTKQAFSFI SKEAEHKGGP RGGFIMHELL LPGQAGRLAG GDELALSKVY 180 PSPRVATKKR SRSQGQGPTA SATRTAAASS APAPTSSPPL LQRSCDVFSS ARSSSAVSSP 240 PPSLEPPASS APPSLEASSL GPASSAPGPA SSSPPPIQGS ASSPRHRQGA AKRVLLLEVG 300 DSPPREGHNI SCHQVYRAME VLGPGRHVPI DCADLFLLDS GKGKRQRTAA EF

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MASIGNGKPD AQGQERQAAR LLPPAEVPPP HTDAGLVVLF DLLRRRVDGF PTWMLPAYLV  60
HGVDVYGHHP QDLLRRHPPA TSPDGKRASY FVNLVRPLTA TDARRSRVVP GGFWKSERAP  120
VPVEAAPDKM IGTKQAFSFI SKEAEHKGGP RGGFIMHELL LPGQAGRLAG GDELALSKVY  180
PSPRVATKKR SRSQGQGPTA SATRTAAASS APAPTSSPPL LQRSCDVFSS ARSSSAVSSP  240
PPSLEPPASS APPSLEASSL GPASSAPGPA SSSPPPIQGS ASSPRHRQGA AKRVLLLEVG  300
DSPPREGHNI SCHQVYRAME VLGPGRHVPI DCADLFLLDS GKGKRQRTAA EF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	342	347	KGKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	3e-07	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG073900.4