PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG070200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 192aa MW: 22138.1 Da PI: 9.8817 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 79 | 8.8e-25 | 3 | 91 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 f+ Y+ ++GF+vr+++++ksk +g it++++vCs+eg+r+ +k++ ++++r+raetrtgCk ++ ++ ++ +g++ev++l++eHnH l+ TRIDC7BG070200.1 3 FWTCYGGHIGFDVRVNYENKSKLDGAITSARYVCSNEGYRRIDKRD-HNTKRPRAETRTGCKVRMGITIDReTGNYEVHELVTEHNHVLQ 91 999****************************************999.99*******************9999***************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
WGFWTCYGGH IGFDVRVNYE NKSKLDGAIT SARYVCSNEG YRRIDKRDHN TKRPRAETRT 60 GCKVRMGITI DRETGNYEVH ELVTEHNHVL QLPGTCHLMP SQRKISTLQA FDIEIADDSG 120 IVPKAAHELA SRQVGGSSNL TYTPRDHKNY LRTKRQRELI YGEAGSMLKY FRDKKMRILH 180 LNMTYNTTAM NK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-25 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG070200.1 |