PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 818aa MW: 88440.3 Da PI: 7.9695

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.5	5e-07	78	95	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H Cq CH+GpC++C TRIDC7BG068920.3 78 CGNHACQDVCHPGPCGEC 95 ****************** PP
2	zf-NF-X1	21	7.2e-07	136	153	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ CHeG+CppC TRIDC7BG068920.3 136 CGVHRCKVACHEGECPPC 153 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
PVTCGQRCEK LLPCRRHRCE KVCHTGPCGD CEVNFPAQCF CGKKTETLLC GEMVLKGKLS 60 DKDGVFSCSE VCSHNLACGN HACQDVCHPG PCGECELLPG KVTTCHCGKT RLQEKRASCL 120 DPIPTCDKVC DKRLPCGVHR CKVACHEGEC PPCLVRVEQR CRCGSSGQMV ECYKVLKEEF 180 RCNKPCGRKK NCGRHRCSEL CCPLSKPFAQ HQGDSMDPHF CQIPCGKKLR CGQHGCQHLC 240 HSGHCDPCRE TIFHDLTCAC GRTSIPPPQP CGTPTPSCPH QCMVPQPCGH PASHQCHFGD 300 CPPCVVPVTR ECVGGHVMLR NIPCGSKDIR CNQPCGKNRQ CGLHACARTC HPAPCDPPPA 360 NGEASSSSGG KVSCGQLCGV PRRECKHTCN APCHPSSPCP DVRCEHRVTI ACSCGRITTA 420 VPCSAGGAYN GDSAFDISVM QQLPMPLQPV ESNGKRVPVG QRKLCCDEEC AKMERKRVLA 480 EAFDITPPNL DALHFGENSN ASDLLSDLFR REPKWVLAIE ERCKFLVLGK TKGNSSSNIK 540 FHVFCHMMKD KRDAIRLIAD RWKLSVQGVG WEPKRFITVH VTPKSKVPAR VLGSKPGVPV 600 SASHPYFDPM VDMDPRLVVA MLDLPRDADV SSLVLRFGGE CELVWLNDKN AAAVFSDPAR 660 AATALRRLDY GSAYQGAAMF CPSSITQASV SSNVWVGAQR DGGLAAKSSA NPWKASQFEP 720 DPSGDWTVLS HASGSVWKRG DTPAQVMGSS NRWNALESDA ATSSGPTDKR KPPLRTETGS 780 SSSAPRVGAG SSAAPSAGQS VSKLQPDVEV EDWEESCE

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

PVTCGQRCEK LLPCRRHRCE KVCHTGPCGD CEVNFPAQCF CGKKTETLLC GEMVLKGKLS  60
DKDGVFSCSE VCSHNLACGN HACQDVCHPG PCGECELLPG KVTTCHCGKT RLQEKRASCL  120
DPIPTCDKVC DKRLPCGVHR CKVACHEGEC PPCLVRVEQR CRCGSSGQMV ECYKVLKEEF  180
RCNKPCGRKK NCGRHRCSEL CCPLSKPFAQ HQGDSMDPHF CQIPCGKKLR CGQHGCQHLC  240
HSGHCDPCRE TIFHDLTCAC GRTSIPPPQP CGTPTPSCPH QCMVPQPCGH PASHQCHFGD  300
CPPCVVPVTR ECVGGHVMLR NIPCGSKDIR CNQPCGKNRQ CGLHACARTC HPAPCDPPPA  360
NGEASSSSGG KVSCGQLCGV PRRECKHTCN APCHPSSPCP DVRCEHRVTI ACSCGRITTA  420
VPCSAGGAYN GDSAFDISVM QQLPMPLQPV ESNGKRVPVG QRKLCCDEEC AKMERKRVLA  480
EAFDITPPNL DALHFGENSN ASDLLSDLFR REPKWVLAIE ERCKFLVLGK TKGNSSSNIK  540
FHVFCHMMKD KRDAIRLIAD RWKLSVQGVG WEPKRFITVH VTPKSKVPAR VLGSKPGVPV  600
SASHPYFDPM VDMDPRLVVA MLDLPRDADV SSLVLRFGGE CELVWLNDKN AAAVFSDPAR  660
AATALRRLDY GSAYQGAAMF CPSSITQASV SSNVWVGAQR DGGLAAKSSA NPWKASQFEP  720
DPSGDWTVLS HASGSVWKRG DTPAQVMGSS NRWNALESDA ATSSGPTDKR KPPLRTETGS  780
SSSAPRVGAG SSAAPSAGQS VSKLQPDVEV EDWEESCE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068920.3