PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068920.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 1061aa MW: 114946 Da PI: 8.2599

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068920.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.1	6.6e-07	355	372	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H Cq CH+GpC++C TRIDC7BG068920.2 355 CGNHACQDVCHPGPCGEC 372 ****************** PP
2	zf-NF-X1	20.6	9.6e-07	413	430	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ CHeG+CppC TRIDC7BG068920.2 413 CGVHRCKVACHEGECPPC 430 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXQRRPNRH NNGPAPPPQE RAPPSGPANS 60 PVPRRQERAP PSGPANASAP RRQERAPAPV AAAAAAGGGP VPQLVQEIQD KLARGAVECM 120 ICYDMVRRSA PVWSCGSCFS IFHLPCIRKW ARSPASVSDA SAPASDAWRC PGCQSVQDVR 180 ARDIAYTCFC RRRRDPPNDL FLTPHSCGEP CSKPLGKADP AASTKGGDDD DVATRCPHVC 240 VLQCHPGPCP PCKAFAPERP CPCGKQSITR RCADRSTPVT CGQRCEKLLP CRRHRCEKVC 300 HTGPCGDCEV NFPAQCFCGK KTETLLCGEM VLKGKLSDKD GVFSCSEVCS HNLACGNHAC 360 QDVCHPGPCG ECELLPGKVT TCHCGKTRLQ EKRASCLDPI PTCDKVCDKR LPCGVHRCKV 420 ACHEGECPPC LVRVEQRCRC GSSGQMVECY KVLKEEFRCN KPCGRKKNCG RHRCSELCCP 480 LSKPFAQHQG DSMDPHFCQI PCGKKLRCGQ HGCQHLCHSG HCDPCRETIF HDLTCACGRT 540 SIPPPQPCGT PTPSCPHQCM VPQPCGHPAS HQCHFGDCPP CVVPVTRECV GGHVMLRNIP 600 CGSKDIRCNQ PCGKNRQCGL HACARTCHPA PCDPPPANGE ASSSSGGKVS CGQLCGVPRR 660 ECKHTCNAPC HPSSPCPDVR CEHRVTIACS CGRITTAVPC SAGGAYNGDS AFDISVMQQL 720 PMPLQPVESN GKRVPVGQRK LCCDEECAKM ERKRVLAEAF DITPPNLDAL HFGENSNASD 780 LLSDLFRREP KWVLAIEERC KFLVLGKTKG NSSSNIKFHV FCHMMKDKRD AIRLIADRWK 840 LSVQGVGWEP KRFITVHVTP KSKVPARVLG SKPGVPVSAS HPYFDPMVDM DPRLVVAMLD 900 LPRDADVSSL VLRFGGECEL VWLNDKNAAA VFSDPARAAT ALRRLDYGSA YQGAAMFCPS 960 SITQASVSSN VWVGAQRDGG LAAKSSANPW KASQFEPDPS GDWTVLSHAS GSVWKRGDTP 1020 AQVMGSSNRW NALESDAATS SGPTDKRKPP LRTETGSSSS A

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXQRRPNRH NNGPAPPPQE RAPPSGPANS  60
PVPRRQERAP PSGPANASAP RRQERAPAPV AAAAAAGGGP VPQLVQEIQD KLARGAVECM  120
ICYDMVRRSA PVWSCGSCFS IFHLPCIRKW ARSPASVSDA SAPASDAWRC PGCQSVQDVR  180
ARDIAYTCFC RRRRDPPNDL FLTPHSCGEP CSKPLGKADP AASTKGGDDD DVATRCPHVC  240
VLQCHPGPCP PCKAFAPERP CPCGKQSITR RCADRSTPVT CGQRCEKLLP CRRHRCEKVC  300
HTGPCGDCEV NFPAQCFCGK KTETLLCGEM VLKGKLSDKD GVFSCSEVCS HNLACGNHAC  360
QDVCHPGPCG ECELLPGKVT TCHCGKTRLQ EKRASCLDPI PTCDKVCDKR LPCGVHRCKV  420
ACHEGECPPC LVRVEQRCRC GSSGQMVECY KVLKEEFRCN KPCGRKKNCG RHRCSELCCP  480
LSKPFAQHQG DSMDPHFCQI PCGKKLRCGQ HGCQHLCHSG HCDPCRETIF HDLTCACGRT  540
SIPPPQPCGT PTPSCPHQCM VPQPCGHPAS HQCHFGDCPP CVVPVTRECV GGHVMLRNIP  600
CGSKDIRCNQ PCGKNRQCGL HACARTCHPA PCDPPPANGE ASSSSGGKVS CGQLCGVPRR  660
ECKHTCNAPC HPSSPCPDVR CEHRVTIACS CGRITTAVPC SAGGAYNGDS AFDISVMQQL  720
PMPLQPVESN GKRVPVGQRK LCCDEECAKM ERKRVLAEAF DITPPNLDAL HFGENSNASD  780
LLSDLFRREP KWVLAIEERC KFLVLGKTKG NSSSNIKFHV FCHMMKDKRD AIRLIADRWK  840
LSVQGVGWEP KRFITVHVTP KSKVPARVLG SKPGVPVSAS HPYFDPMVDM DPRLVVAMLD  900
LPRDADVSSL VLRFGGECEL VWLNDKNAAA VFSDPARAAT ALRRLDYGSA YQGAAMFCPS  960
SITQASVSSN VWVGAQRDGG LAAKSSANPW KASQFEPDPS GDWTVLSHAS GSVWKRGDTP  1020
AQVMGSSNRW NALESDAATS SGPTDKRKPP LRTETGSSSS A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068920.2