PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG068610.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 903aa MW: 97104.1 Da PI: 7.8251

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG068610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.3	5.1e-06	214	231	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG H+C+ +CHeG+CppC TRIDC7BG068610.1 214 CGLHRCKGTCHEGECPPC 231 ****************** PP
2	zf-NF-X1	16.8	1.5e-05	419	435	1	17
zf-NF-X1 1 CGkHkCqklCHeGpCpp 17 CG H C ++CH+ pC+p TRIDC7BG068610.1 419 CGLHACARPCHPSPCDP 435 ***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
DLYLTPHSCG EPCSKPLDRA DPAAAKGNDD DDVAARCPHA CVLQCHPGPC PPCKAFAPER 60 PCPCGKQSIT RRCADRSTPV TCGQPCEKLL PCRRHRCDKV CHTGPCGECE VDYPAQCFCG 120 KKTETLLCGE MVLKGKLSDK DGVFSCSEVC GHNLACANHA CQDVCHPGPC GECELVPEKV 180 TTCHCGKTRL QEKRTSCLDP IATCDKVCDK RLPCGLHRCK GTCHEGECPP CLVRVEQRCR 240 CGSSGQMVEC YKVSKEEFRC NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GDSMDPHFCQ 300 IPCGKKLRCG QHGCQHLCHS GHCDPCRETI FNDLTCACGR SSIPPPQPCG TPTPSCPHQC 360 IVPQPCGHPA SHQCHFGDCP PCVVPVMREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG 420 LHACARPCHP SPCDPPPANG EASSGSGGKV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV 480 RCEHRATITC SCGRISTTVP CSAGGAYNGD STFDISVMQQ LPMALQPVES NGKRVPLGQR 540 KLCCDEECAK VERKRVLAEA FDITPPNLDA LHFGENSNAS DLVSDLFRRE PKWVLAIEER 600 CKFLVLGKTR GNSSSNMKFH VFCPMLKDKR DAIRLIADRW KLSVQAVGWE PKRFVTVHVT 660 PKSKVPARVL GSKPGVPVSA AHPYFDSMVD MDPRLVVAML DLPRDADVNS LVLRFGGECE 720 LVWLNDKNAA AVFSDPARAA TALRRLDYGS AYQGAAMFCP SSITQASLSS NVWVGAPRDG 780 GLATASSASA WKKDSPSELK PNPHAVMTVL GRAPGTSVLG HSPGSVWKPA VQVTSSNRWN 840 ALEPDAATSS GPADKPKPPP HTDAGSSTSA PRVGAGSSAE PSAGQSVSKL QPDIEVEDWE 900 EIE

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

DLYLTPHSCG EPCSKPLDRA DPAAAKGNDD DDVAARCPHA CVLQCHPGPC PPCKAFAPER  60
PCPCGKQSIT RRCADRSTPV TCGQPCEKLL PCRRHRCDKV CHTGPCGECE VDYPAQCFCG  120
KKTETLLCGE MVLKGKLSDK DGVFSCSEVC GHNLACANHA CQDVCHPGPC GECELVPEKV  180
TTCHCGKTRL QEKRTSCLDP IATCDKVCDK RLPCGLHRCK GTCHEGECPP CLVRVEQRCR  240
CGSSGQMVEC YKVSKEEFRC NKPCGRKKNC GRHRCSECCC PLSKPFAQHQ GDSMDPHFCQ  300
IPCGKKLRCG QHGCQHLCHS GHCDPCRETI FNDLTCACGR SSIPPPQPCG TPTPSCPHQC  360
IVPQPCGHPA SHQCHFGDCP PCVVPVMREC VGGHVMLRNI PCGSKDIRCN QPCGKNRQCG  420
LHACARPCHP SPCDPPPANG EASSGSGGKV SCGQLCGVPR RECKHTCNAP CHPSSPCPDV  480
RCEHRATITC SCGRISTTVP CSAGGAYNGD STFDISVMQQ LPMALQPVES NGKRVPLGQR  540
KLCCDEECAK VERKRVLAEA FDITPPNLDA LHFGENSNAS DLVSDLFRRE PKWVLAIEER  600
CKFLVLGKTR GNSSSNMKFH VFCPMLKDKR DAIRLIADRW KLSVQAVGWE PKRFVTVHVT  660
PKSKVPARVL GSKPGVPVSA AHPYFDSMVD MDPRLVVAML DLPRDADVNS LVLRFGGECE  720
LVWLNDKNAA AVFSDPARAA TALRRLDYGS AYQGAAMFCP SSITQASLSS NVWVGAPRDG  780
GLATASSASA WKKDSPSELK PNPHAVMTVL GRAPGTSVLG HSPGSVWKPA VQVTSSNRWN  840
ALEPDAATSS GPADKPKPPP HTDAGSSTSA PRVGAGSSAE PSAGQSVSKL QPDIEVEDWE  900
EIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG068610.1