PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7BG068320.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 130aa MW: 15167.3 Da PI: 11.2141 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4.2e-08 | 50 | 96 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 WT eE + lvd+v +G g W++ ++ Rt+ ++k++w+++ TRIDC7BG068320.5 50 HWTSEEVKELVDGVSVYGVGPWTKLKNERFqiSIRTAVHLKDKWRNL 96 6***********************9987667989***********97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 130 aa Download sequence |
YIPKSGWRHG SRVRSARERG TWSINIEPCS RDLRSASEGQ KHGSRRNNDH WTSEEVKELV 60 DGVSVYGVGP WTKLKNERFQ ISIRTAVHLK DKWRNLVKAF TGNVKRRITP RLDKNCIEKI 120 KRLAADYPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G17460.1 | 1e-12 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7BG068320.5 |