PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7BG066140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 250aa MW: 27392.8 Da PI: 9.2517 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 93.5 | 1.6e-29 | 186 | 245 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ k++++pr+Y+rC++a +C+vkkkv+rsaed+++++ tY g+Hnh TRIDC7BG066140.1 186 VKDGFQWRKYGQKVTKDNPCPRAYFRCSFApSCQVKKKVQRSAEDKTMLVATYDGDHNHA 245 58***************************99****************************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 250 aa Download sequence |
MDEQWMIGQT SLSLGLNVGG PRGAPSVTRV LLEEDFMSSK KNHEVEALEA ELRRVGEENR 60 RLSHMLRALV AKYADLQCKV SGTMAAANNH HQSWTTSEDG SSASATRKRA RSDSLDTASR 120 NPSPPLAAAG SSGRFAVSVT VGPDQAECTP VHEPCNSKRV RADEVKASRV SKLYVHADPS 180 DVSLVVKDGF QWRKYGQKVT KDNPCPRAYF RCSFAPSCQV KKKVQRSAED KTMLVATYDG 240 DHNHAPPPKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80840.1 | 2e-43 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7BG066140.1 |