PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG060320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 224aa MW: 26463.4 Da PI: 9.026 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 81.2 | 1.9e-25 | 25 | 119 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrks+ + n+ i+ r+ vCs +g+re+++ k ++++rr+r+ tr+gC+akl++++++ +g+w v+++ eH+H+l TRIDC7BG060320.1 25 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSSQGFREDKHMKrkmEDRKRRPRSLTRVGCNAKLVITRQEeTGRWFVKDFIDEHSHPL 117 6******************************************999888889999*******************99****************9 PP FAR1 90 ap 91 ap TRIDC7BG060320.1 118 AP 119 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
ASDESMFEYV NVVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNK YIILRKIVCS 60 SQGFREDKHM KRKMEDRKRR PRSLTRVGCN AKLVITRQEE TGRWFVKDFI DEHSHPLAPR 120 DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFDKVGCI KRDVYNFCHA 180 NKQETISAGD AKTVIMHMMA RRGRDVDFFF KYLVDEHCHL KGLF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 81 | DRKRRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-33 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG060320.1 |