PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG060060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 256aa MW: 28558 Da PI: 4.7956

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG060060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	172.5	4.7e-54	82	185	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw+++ +++atdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtdi+d TRIDC7BG060060.1 82 QLQQFWAERlseVDQATDFKNHTLPLARIKKIMKADEDVRMISAEAPVVFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAISRTDIYD 174 89***9877799*************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdi+prde+ TRIDC7BG060060.1 175 FLVDIIPRDEM 185 *******87 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEPSSQPQPA TGDVVAGGSQ VYPASAYPRA ATIAVAPGII PAGSQPASPF PANPAQLNAQ 60 NQLIYEQAQQ FQQQLQQQQQ RQLQQFWAER LSEVDQATDF KNHTLPLARI KKIMKADEDV 120 RMISAEAPVV FAKACEIFIL ELTLRSWMHT EENKRRTLQK NDIAAAISRT DIYDFLVDII 180 PRDEMREEGV GIPRAGQPPL LGDTPYPYYY PQQVPGAVMG YGGQQVQQGH LPYVWQDPQE 240 QQQQGPHAEQ HQSESG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	161	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-66	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG060060.1