PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG060000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 228aa MW: 25895.3 Da PI: 4.6729 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 153.2 | 4.6e-48 | 50 | 153 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q +e+atd+knh lPl+ri+ki+kadedv+misaeaP+l++kace+f le+t+rsw+ ++e krr l++sd+aaav+rtdi+d TRIDC7BG060000.1 50 QLQQFWAEQrseMEQATDIKNHPLPLTRIRKIMKADEDVRMISAEAPALFAKACEMFTLEMTMRSWMVTKEDKRRILQRSDVAAAVARTDIYD 142 89******9999********************************************************************************* PP NF-YC 91 flvdivprdel 101 fl+d +e+ TRIDC7BG060000.1 143 FLLDLFASEET 153 ****9988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MVPMGVVTPA GSQPTRPFPG NPAQLSAQEQ LMYEQSQEYQ LQLQQQRQRQ LQQFWAEQRS 60 EMEQATDIKN HPLPLTRIRK IMKADEDVRM ISAEAPALFA KACEMFTLEM TMRSWMVTKE 120 DKRRILQRSD VAAAVARTDI YDFLLDLFAS EETKQGFLLP MAGQGQQPMG AQAGAYPYYY 180 APEQQVAGAS MVYGGPSTYV WQEPQVQEQG HPSGTYVWQE PPQQQEGP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 6e-48 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG060000.1 |