PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG059310.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 252aa    MW: 27621.2 Da    PI: 6.686
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG059310.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.8e-124084147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC7BG059310.6 40 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 84
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
EQQQQVAVAA GPPMAVPADA AAAEDARMKV RKPYTITKSR ESWTEPEHDK FLEALQLFDR  60
DWKKIEAFVG SKTVIQIRSH AQKYFLKVQK NGTGEHLPPP RPKRKAAHPY PQKASKTASQ  120
AVLSQQPAPP PPPPRDQDSV NVSMDASMVV PSTNANAVVP SWDNALVQPT QVTSAIATNN  180
CSSSIESQSG TWPTSEAVEQ ENVLPQMRAM PDFSQVYNFL GSVFDPDTTG HLQRLKAMDP  240
IDVETVIILL SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-69MYB_related family protein