PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 859aa    MW: 94876.5 Da    PI: 6.4363
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.2e-2485186199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7BG057850.9  85 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 173
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG057850.9 174 NDNNQLLLGIRRA 186
                       777778**99997 PP
2Auxin_resp116.71.9e-38211294183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.9 211 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 294
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    
GGVLPTGSQR AAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL  60
NPQELKDPYL PAELGTANKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTMQP  120
PAQELFAKDL HGNEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNDNNQLL  180
LGIRRATRPQ TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PCEFVIPLAK  240
YVKAVYHTRI SVGMRFRMLF ETEESSVRRY MGTITGISDL DAVRWPNSHW RSVKVGWDES  300
TAGERQPRVS LWEIEPLTTF PMYPTPFPLR LKRPWPTGLP SLHGGKDDDL TSSLMWLRDS  360
ANPGFQSLNF GGAGMNPWMQ PRLDASLLGL QPDIYQTMAA AAFQDPTKMS PTMLQFQQPQ  420
NMVGRATPLL QSQILQQMQP QFQQQSYLQN INGATIQGQA QSEFLQQQLQ RCQSFNEQKP  480
QLLQQQESNQ QQSQGMQVPQ HQHMQQQKNM ANYQSAYSQL SPGPQSSPTA LQTALPFSQS  540
QSFPDTNMSS LSPSGAPAMH NTLGPFSSET ASHLSMSRPT AVPVPDSWSS KRVAVESLIP  600
SRPQSTTHME QLSSTPPSIP QSSALAPLPG RGCLVDQDGS SDPQNHLLFG VNIDSHSLLM  660
QGGLHDENDS TAMPYSTSNF LSPSQHDFSL DQTLNSSGCL DESGYVPCSH TPDQVNQPPA  720
TFVKVYKSGT YGRSLDITKF SNYHELRREL GRLFGLEGQL EDPMRSGWQL VFVDREEDVL  780
LVGDDPWQEF VNSVSCIKIL SPQEVQQMGK QGLELLSSAS GKRLGGGGGG SSCDDYASRQ  840
ESRSLSTGIA SVGSVEVEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein