PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 809aa    MW: 89863.2 Da    PI: 6.4098
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.7e-24121222199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7BG057850.6 121 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 209
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG057850.6 210 NDNNQLLLGIRRA 222
                       777778**99997 PP
2Auxin_resp116.91.8e-38247330183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.6 247 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 330
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 809 aa     Download sequence    
ISHPISSAEE HKCLNSELWH ACAGPLVSLP AVGSRVVYFP QGHSEQVAAS TNKEIESQIP  60
NYPNLPPQLI CQLHNVTMHA DAETDEVYAQ MTLQPLNPQE LKDPYLPAEL GTANKQPTNY  120
FCKTLTASDT STHGGFSVPR RAAEKVFPPL DFTMQPPAQE LFAKDLHGNE WKFRHIFRGQ  180
PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN DNNQLLLGIR RATRPQTVMP SSVLSSDSMH  240
IGLLAAAAHA ASTNSRFTIF YNPRASPCEF VIPLAKYVKA VYHTRISVGM RFRMLFETEE  300
SSVRRYMGTI TGISDLDAVR WPNSHWRSVK VGWDESTAGE RQPRVSLWEI EPLTTFPMYP  360
TPFPLRLKRP WPTGLRGKDD DLTSSLMWLR DSANPGFQSL NFGGAGMNPW MQPRLDASLL  420
GLQPDIYQTM AAAAFQDPTK MSPTMLQFQQ PQNMVGRATP LLQSQILQQM QPQFQQQSYL  480
QNINGATIQE SNQQQSQGMQ VPQHQHMQQQ KNMANYQSAY SQLSPGPQSS PTALQTALPF  540
SQSQSFPDTN MSSLSPSGAP AMHNTLGPFS SETASHLSMS RPTAVPVPDS WSSKRVAVES  600
LIPSRPQSTT HMEQLSSTPP SIPQSSALAP LPGRGCLVDQ DGSSDPQNHL LFGVNIDSHS  660
LLMQGGLHDE NDSTAMPYST SNFLSPSQHD FSLDQTLNSS GCLDESGYVP CSHTPDQVYK  720
SGTYGRSLDI TKFSNYHELR RELGRLFGLE GQLEDPMRSG WQLVFVDREE DVLLVGDDPW  780
QEFVNSVSCI KILSPQEVQQ MGKQGLELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein