PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 805aa    MW: 89311.7 Da    PI: 6.4022
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.7e-24123224199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7BG057850.5 123 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 211
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG057850.5 212 NDNNQLLLGIRRA 224
                       777778**99997 PP
2Auxin_resp116.91.7e-38249332183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.5 249 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 332
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
SPISHPISSA EEHKCLNSEL WHACAGPLVS LPAVGSRVVY FPQGHSEQVA ASTNKEIESQ  60
IPNYPNLPPQ LICQLHNVTM HADAETDEVY AQMTLQPLNP QELKDPYLPA ELGTANKQPT  120
NYFCKTLTAS DTSTHGGFSV PRRAAEKVFP PLDFTMQPPA QELFAKDLHG NEWKFRHIFR  180
GQPKRHLLTT GWSVFVSAKR LVAGDSVLFI WNDNNQLLLG IRRATRPQTV MPSSVLSSDS  240
MHIGLLAAAA HAASTNSRFT IFYNPRASPC EFVIPLAKYV KAVYHTRISV GMRFRMLFET  300
EESSVRRYMG TITGISDLDA VRWPNSHWRS VKVGWDESTA GERQPRVSLW EIEPLTTFPM  360
YPTPFPLRLK RPWPTGLPSL HGGKDDDLTS SLMWLRDSAN PGFQSLNFGG AGMNPWMQPR  420
LDASLLGLQP DIYQTMAAAA FQDPTKMSPT MLQFQQPQNM VGRATPLLQS QILQQMQPQF  480
QQQSYLQNIN GATIQGQAQS EFLQQQLQRC QSFNEQKPQL LQQQESNQQQ SQGPQSSPTA  540
LQTALPFSQS QSFPDTNMSS LSPSGAPAMH NTLGPFSSET ASHLSMSRPT AVPVPDSWSS  600
KRVAVESLIP SRPQSTTHME QLSSTPPSIP QSSALAPLPG RGCLVDQDGS SDPQNHLLFG  660
VNIDSHSLLM QGGLHDENDS TTLNSSGCLD ESGYVPCSHT PDQVNQPPAT FVKVYKSGTY  720
GRSLDITKFS NYHELRRELG RLFGLEGQLE DPMRSGWQLV FVDREEDVLL VGDDPWQEFV  780
NSVSCIKILS PQEVQQMGKQ GLELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein