PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 805aa    MW: 89223.7 Da    PI: 6.5415
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.7e-24124225199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7BG057850.4 124 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 212
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG057850.4 213 NDNNQLLLGIRRA 225
                       777778**99997 PP
2Auxin_resp116.91.7e-38250333183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.4 250 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 333
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
ISPISHPISS AEEHKCLNSE LWHACAGPLV SLPAVGSRVV YFPQGHSEQV AASTNKEIES  60
QIPNYPNLPP QLICQLHNVT MHADAETDEV YAQMTLQPLN PQELKDPYLP AELGTANKQP  120
TNYFCKTLTA SDTSTHGGFS VPRRAAEKVF PPLDFTMQPP AQELFAKDLH GNEWKFRHIF  180
RGQPKRHLLT TGWSVFVSAK RLVAGDSVLF IWNDNNQLLL GIRRATRPQT VMPSSVLSSD  240
SMHIGLLAAA AHAASTNSRF TIFYNPRASP CEFVIPLAKY VKAVYHTRIS VGMRFRMLFE  300
TEESSVRRYM GTITGISDLD AVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP  360
MYPTPFPLRL KRPWPTGLPS LHGGKDDDLT SSLMWLRDSA NPGFQSLNFG GAGMNPWMQP  420
RLDASLLGLQ PDIYQTMAAA AFQDPTKMSP TMLQFQQPQN MVGRATPLLQ SQILQQMQPQ  480
FQQQSYLQNI NGATIQESNQ QQSQGMQVPQ HQHMQQQKNM ANYQSAYSQL SPGPQSSPTA  540
LQTALPFSQS QSFPDTNMSS LSPSGAPAMH NTLGPFSSET ASHLSMSRPT AVPVPDSWSS  600
KRVAVESLIP SRPQSTTHME QLSSTPPSIP QSSALAPLPG RGCLVDQDGS SDPQNHLLFG  660
VNIDSHSLLM QGGLHDENDS TTLNSSGCLD ESGYVPCSHT PDQVNQPPAT FVKVYKSGTY  720
GRSLDITKFS NYHELRRELG RLFGLEGQLE DPMRSGWQLV FVDREEDVLL VGDDPWQEFV  780
NSVSCIKILS PQEVQQMGKQ GLELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein