PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG057850.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 898aa MW: 99082.3 Da PI: 6.4453 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.4 | 6.6e-24 | 126 | 227 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae+ ++++++ +l +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F + TRIDC7BG057850.3 126 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 214 99*****************************96555544..8************************************************..7 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ TRIDC7BG057850.3 215 NDNNQLLLGIRRA 227 777778**99997 PP | |||||||
2 | Auxin_resp | 116.7 | 2e-38 | 252 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7BG057850.3 252 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 335 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 898 aa Download sequence |
SAISPISHPI SSAEEHKCLN SELWHACAGP LVSLPAVGSR VVYFPQGHSE QVAASTNKEI 60 ESQIPNYPNL PPQLICQLHN VTMHADAETD EVYAQMTLQP LNPQELKDPY LPAELGTANK 120 QPTNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDFTMQ PPAQELFAKD LHGNEWKFRH 180 IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNDNNQL LLGIRRATRP QTVMPSSVLS 240 SDSMHIGLLA AAAHAASTNS RFTIFYNPRA SPCEFVIPLA KYVKAVYHTR ISVGMRFRML 300 FETEESSVRR YMGTITGISD LDAVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT 360 FPMYPTPFPL RLKRPWPTGL PSLHGGKDDD LTSSLMWLRD SANPGFQSLN FGGAGMNPWM 420 QPRLDASLLG LQPDIYQTMA AAAFQDPTKM SPTMLQFQQP QNMVGRATPL LQSQILQQMQ 480 PQFQQQSYLQ NINGATIQGQ AQSEFLQQQL QRCQSFNEQK PQLLQQQESN QQQSQGMQVP 540 QHQHMQQQKN MANYQSAYSQ LSPGPQSSPT ALQTALPFSQ SQSFPDTNMS SLSPSGAPAM 600 HNTLGPFSSE TASHLSMSRP TAVPVPDSWS SKRVAVESLI PSRPQSTTHM EQLSSTPPSI 660 PQSSALAPLP GRGCLVDQDG SSDPQNHLLF GVNIDSHSLL MQGGLHDEND STAMPYSTSN 720 FLSPSQHDFS LDQTLNSSGC LDESGYVPCS HTPDQVNQPP ATFVKVYKSG TYGRSLDITK 780 FSNYHELRRE LGRLFGLEGQ LEDPMRSGWQ LVFVDREEDV LLVGDDPWQE FVNSVSCIKI 840 LSPQEVQQMG KQGLELLSSA SGKRLGGGGG GSSCDDYASR QESRSLSTGI ASVGSVEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.2 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG057850.3 |