PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 718aa    MW: 79472.7 Da    PI: 7.0323
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.84.8e-24126227199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC7BG057850.2 126 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 214
                       99*****************************96555544..8************************************************..7 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC7BG057850.2 215 NDNNQLLLGIRRA 227
                       777778**99997 PP
2Auxin_resp117.11.5e-38252335183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.2 252 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 335
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
SAISPISHPI SSAEEHKCLN SELWHACAGP LVSLPAVGSR VVYFPQGHSE QVAASTNKEI  60
ESQIPNYPNL PPQLICQLHN VTMHADAETD EVYAQMTLQP LNPQELKDPY LPAELGTANK  120
QPTNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDFTMQ PPAQELFAKD LHGNEWKFRH  180
IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNDNNQL LLGIRRATRP QTVMPSSVLS  240
SDSMHIGLLA AAAHAASTNS RFTIFYNPRA SPCEFVIPLA KYVKAVYHTR ISVGMRFRML  300
FETEESSVRR YMGTITGISD LDAVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT  360
FPMYPTPFPL RLKRPWPTGL PSLHGGKDDD LTSSLMWLRD SANPGFQSLN FGGAGMNPWM  420
QPRLDASLLG LQPDIYQTMA AAAFQDPTKM SPTMLQFQQP QNMVGRATPL LQSQILQQMQ  480
PQFQQQSYLQ NINGATIQGQ AQSEFLQQQL QRCQSFNEQK PQLLQQQESN QQQSQGMQVP  540
QHQHMQQQKN MANYQSAYSQ LSPGPQSSPT ALQTALPFSQ SQSFPDTNMS SLSPSGAPAM  600
HNTLGPFSSE TASHLSMSRP TAVPVPDSWS SKRVAVESLI PSRPQSTTHM EQLSSTPPSI  660
PQSSALAPLP GRGCLVDQDG SSDPQNHLLF GVNIDSHSLL MQGGLHDEND STLLSVLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein