PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057850.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 367aa    MW: 41194.9 Da    PI: 9.0404
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057850.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.41.6e-2475176199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l  +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC7BG057850.14  75 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftMQPPAQ--ELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 162
                        99*****************************96555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC7BG057850.14 163 WNDNNQLLLGIRRA 176
                        7777778***9997 PP
2Auxin_resp118.55.3e-39201284183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  TRIDC7BG057850.14 201 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 284
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
VAASTNKEIE SQIPNYPNLP PQLICQLHNV TMHADAETDE VYAQMTLQPL NPQELKDPYL  60
PAELGTANKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFTMQP PAQELFAKDL  120
HGNEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNDNNQLL LGIRRATRPQ  180
TVMPSSVLSS DSMHIGLLAA AAHAASTNSR FTIFYNPRAS PCEFVIPLAK YVKAVYHTRI  240
SVGMRFRMLF ETEESSVRRY MGTITGISDL DAVRWPNSHW RSVKVGWDES TAGERQPRVS  300
LWEIEPLTTF PMYPTPFPLR LKRPWPTGLP SLHGGKDDDL TSSLMWLRDS ANPGFQSLNF  360
GGAGMNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein