PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG057850.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 763aa MW: 84223.8 Da PI: 6.8922

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG057850.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.4	1.6e-10	45	90	52	99
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ TRIDC7BG057850.10 45 FAGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDNNQLLLGIRRA 90 567899************************..777777899997 PP
2	Auxin_resp	117	1.6e-38	115	198	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+ eFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k TRIDC7BG057850.10 115 AAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 198 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MAASLFPGEQ LRKCFLRWIS PCSLQHRSCL QKIFMAMSGN SVTSFAGQPK RHLLTTGWSV 60 FVSAKRLVAG DSVLFIWNDN NQLLLGIRRA TRPQTVMPSS VLSSDSMHIG LLAAAAHAAS 120 TNSRFTIFYN PRASPCEFVI PLAKYVKAVY HTRISVGMRF RMLFETEESS VRRYMGTITG 180 ISDLDAVRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPTP FPLRLKRPWP 240 TGLPSLHGGK DDDLTSSLMW LRDSANPGFQ SLNFGGAGMN PWMQPRLDAS LLGLQPDIYQ 300 TMAAAAFQDP TKMSPTMLQF QQPQNMVGRA TPLLQSQILQ QMQPQFQQQS YLQNINGATI 360 QGQAQSEFLQ QQLQRCQSFN EQKPQLLQQQ ESNQQQSQGM QVPQHQHMQQ QKNMANYQSA 420 YSQLSPGPQS SPTALQTALP FSQSQSFPDT NMSSLSPSGA PAMHNTLGPF SSETASHLSM 480 SRPTAVPVPD SWSSKRVAVE SLIPSRPQST THMEQLSSTP PSIPQSSALA PLPGRGCLVD 540 QDGSSDPQNH LLFGVNIDSH SLLMQGGLHD ENDSTAMPYS TSNFLSPSQH DFSLDQTLNS 600 SGCLDESGYV PCSHTPDQVN QPPATFVKVY KSGTYGRSLD ITKFSNYHEL RRELGRLFGL 660 EGQLEDPMRS GWQLVFVDRE EDVLLVGDDP WQEFVNSVSC IKILSPQEVQ QMGKQGLELL 720 SSASGKRLGG GGGGSSCDDY ASRQESRSLS TGIASVGSVE VEF

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MAASLFPGEQ LRKCFLRWIS PCSLQHRSCL QKIFMAMSGN SVTSFAGQPK RHLLTTGWSV  60
FVSAKRLVAG DSVLFIWNDN NQLLLGIRRA TRPQTVMPSS VLSSDSMHIG LLAAAAHAAS  120
TNSRFTIFYN PRASPCEFVI PLAKYVKAVY HTRISVGMRF RMLFETEESS VRRYMGTITG  180
ISDLDAVRWP NSHWRSVKVG WDESTAGERQ PRVSLWEIEP LTTFPMYPTP FPLRLKRPWP  240
TGLPSLHGGK DDDLTSSLMW LRDSANPGFQ SLNFGGAGMN PWMQPRLDAS LLGLQPDIYQ  300
TMAAAAFQDP TKMSPTMLQF QQPQNMVGRA TPLLQSQILQ QMQPQFQQQS YLQNINGATI  360
QGQAQSEFLQ QQLQRCQSFN EQKPQLLQQQ ESNQQQSQGM QVPQHQHMQQ QKNMANYQSA  420
YSQLSPGPQS SPTALQTALP FSQSQSFPDT NMSSLSPSGA PAMHNTLGPF SSETASHLSM  480
SRPTAVPVPD SWSSKRVAVE SLIPSRPQST THMEQLSSTP PSIPQSSALA PLPGRGCLVD  540
QDGSSDPQNH LLFGVNIDSH SLLMQGGLHD ENDSTAMPYS TSNFLSPSQH DFSLDQTLNS  600
SGCLDESGYV PCSHTPDQVN QPPATFVKVY KSGTYGRSLD ITKFSNYHEL RRELGRLFGL  660
EGQLEDPMRS GWQLVFVDRE EDVLLVGDDP WQEFVNSVSC IKILSPQEVQ QMGKQGLELL  720
SSASGKRLGG GGGGSSCDDY ASRQESRSLS TGIASVGSVE VEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	1e-152	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG057850.10