PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057810.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 316aa    MW: 35953.2 Da    PI: 8.8094
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057810.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.6e-063049525
                      --SGGGGTS--TTTTT-SS-S CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                      +C+ +   G+C+ G++C++ H
  TRIDC7BG057810.4 30 ECNMYKM-GFCPNGPNCRYKH 49
                      6666666.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
RMPVCRFFRD YGECREPDCA YKHSYDDVKE CNMYKMGFCP NGPNCRYKHA KLPGPPPPVE  60
EVLAKIMQMR SSNFNKFNQH RNNNYNQQGD RPRPPPGSGL PNQNSTDNAS TMQPAAGQQV  120
QTMNQQPQQK QQQVQQQQQQ KPNTNDQVQG VPNGSSNQPT RLATPLPQGS SRYFIVKSCN  180
RENLEISVQQ GIWATQRSNE AKLNEAFESM DNVILIFSIN RTRNFQGCAK MTSRIGGYIG  240
GGNWKSANGT AHYGRNFSLQ WLKLCELSFQ KTHHLRNPYN DNLPVKISRD CQELEPFIGE  300
QLASLLYLES DSELTV