PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057810.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 308aa    MW: 35177.6 Da    PI: 9.4205
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057810.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.6e-063857525
                      --SGGGGTS--TTTTT-SS-S CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                      +C+ +   G+C+ G++C++ H
  TRIDC7BG057810.2 38 ECNMYKM-GFCPNGPNCRYKH 57
                      6666666.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
FLHQFDKARM PVCRFFRDYG ECREPDCAYK HSYDDVKECN MYKMGFCPNG PNCRYKHAKL  60
PGPPPPVEEV LAKIMQMRSS NFNKFNQHRN NNYNQQGDRP RPPPGSGLPN QNSTDNASTM  120
QPAAGQQVQT MNQQPQQKQQ QVQQQQQQKP NTNDQVQGVP NGSSNQPTRL ATPLPQGSSR  180
YFIVKSCNRE NLEISVQQGI WATQRSNEAK LNEAFESMDN VILIFSINRT RNFQGCAKMT  240
SRIGGYIGGG NWKSANGTAH YGRNFSLQWL KLCELSFQKT HHLRNPYNDN LPVKVLFQSI  300
TLCQMCFC